Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911538.1_cds_XP_016461519.1_54830
CDS Infomation

[gene=LOC107784848] [db_xref=GeneID:107784848] [protein=IRK-interacting protein-like] [protein_id=XP_016461519.1] [location=56315..57685] [gbkey=CDS]
Sequence

ATGGATTCTGTTAATCGGTCTGCTGTGACCCCGAGTAAGAGCAAATTGGCTCGCACTTTT
GCTAAGGTTTTGCACATTAGAGCTCTGACAGGAGGAACTCAGAAGCACAAATTCAGTGAA
ATTGTCAAGGATGATGCAGTAAAGAATGATGTAGCGAAGAGCGAGTTACTCAAGAAAGCA
CAGTTCAAGGCCTTTGATGATGAAGATGAAAAGCTGAAACAGAAAGCAGCTACAGAAGCT
TTTCTTGCCAAGCTGTTTGCAAACATCTCAGCTGTTAAAGCAGCATATGCTCAATTGCAG
TTTGCTCAGTCTCCATACGACCCTGATGGTATTCAATCTGCTGATGAGTTGGTGGTATCC
GAGCTGAAAAGCTTGTCTGAATTGAAACAGTGCTTCGTTAAGAAGCAGTTGGATGTGTAT
TCCCCGGAAACCACTCAGATTTTAGCTGAAATTCAGGAGCAGAAGAGCGTATTAAAGACG
TATGATATCATGGGAAAGAAACTGGATTCGCAGCTCAAACTCAAGGATTCAGAAATTACG
TTTCTCGGAGAGAAATTGATCGAGGCTAATAAAGAAAACAAGCTGCTTGAGAAAAGGTTG
AACTCCAGTGGACCGGTGTCTGCTCTGGACAATCTTCACTTTTCAAGTTTGAGCCCTAGC
CATTTTATCATGTTCCTCAGGCAGACAATTAGGTCTATTCGTAGTTTTGTTAGGTTGTTC
AGCAAGGAAATGTTAGCTGCTGGCTGGAACTTAGATGCTGCGGCCAGTTCCATCGAACCT
GATATAGAGTTCCTGAAAGCAAATGACATATGTTATGCTTTTGAATCATTCGTTTGCCGG
GAGATGTTTGATGGTTTCAATTATCCCAACTTTTCCATCTCAACTGAGCCCCTGCCCGAG
CAGACAAAAAGGCAAAGGTTGTTTTTCGACAGATTCATGGAGCTGAGATCTGTTAAACCA
GTAGATTACTTAGCTTGGAAACCCAAATCAACATTTGCAAGATTCTGTCGTGCTAAGTAC
TTGAAACTAATCCATCCCAAGATTGAAGAGTCCATTTTTGGCAACCTGAATCAAAGAAAC
ATACTCAATTCGGGTGAGTATCCGGAGTCAACATTCTTCTCCACATTTAGTGAAATGGCC
AAGCGCATTTGGTTACTGCACTGTCTGGCTTTCTCCTTCGATCCCGTGGCTTCAATCTTT
CAAGTGAGCAGAGGGTGTCGGTTTTCGGATGTGTACATGGAGAGTGTGAACGAAGAAGCA
TTCTTGTCATGGGACGGATCACCGGAAACTGAACCGAGTGTAGGTTTCACGGTAGTTCCA
GGATTCAAGATTAGTACAACTGTTGTTCAGTGTCAAGTTTACCTGTGTTGA

Peptide Sequence

PEP ID

XP_016461519.1
PEP Infomation

PREDICTED: IRK-interacting protein-like [Nicotiana tabacum]
Sequence

MDSVNRSAVTPSKSKLARTFAKVLHIRALTGGTQKHKFSEIVKDDAVKNDVAKSELLKKA
QFKAFDDEDEKLKQKAATEAFLAKLFANISAVKAAYAQLQFAQSPYDPDGIQSADELVVS
ELKSLSELKQCFVKKQLDVYSPETTQILAEIQEQKSVLKTYDIMGKKLDSQLKLKDSEIT
FLGEKLIEANKENKLLEKRLNSSGPVSALDNLHFSSLSPSHFIMFLRQTIRSIRSFVRLF
SKEMLAAGWNLDAAASSIEPDIEFLKANDICYAFESFVCREMFDGFNYPNFSISTEPLPE
QTKRQRLFFDRFMELRSVKPVDYLAWKPKSTFARFCRAKYLKLIHPKIEESIFGNLNQRN
ILNSGEYPESTFFSTFSEMAKRIWLLHCLAFSFDPVASIFQVSRGCRFSDVYMESVNEEA
FLSWDGSPETEPSVGFTVVPGFKISTTVVQCQVYLC

Transcript Sequence

Gene sequence data has not been registered.